PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_21966.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 292aa    MW: 32255.3 Da    PI: 5.5715
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_21966.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM921e-28181611128
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.........tksgy 82 
                   lp+G++F+Ptd el+ e+L+ kv +   ++       +i+e+ +i++++P++Lp  vk +    +fF+k +++y  gkrk+r+          +  +
  MLOC_21966.1  18 LPAGVKFDPTDLELL-EHLEGKVGRAASHVLXxxfipTIEEAeGICYTHPENLP-GVKLDGIASHFFHKISNAYDVGKRKRRKishsdhtvcDEILR 112
                   799************.99*****999944433344435888878**********.566677899******************867777665433557 PP

           NAM  83 WkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                   W++tgk++++l+++g  +g kk+Lv+y   ++   k++kt+W mh+y+l
  MLOC_21966.1 113 WHKTGKSRSILDSNGVIKGWKKILVLYigsRKGGGKTVKTNWRMHQYHL 161
                   ***************************443333345579********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-329180IPR003441NAC domain
PROSITE profilePS5100528.25718180IPR003441NAC domain
PfamPF023651.8E-1219161IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
CKYCIDNTDQ VLSQWPGLPA GVKFDPTDLE LLEHLEGKVG RAASHVLXXX FIPTIEEAEG  60
ICYTHPENLP GVKLDGIASH FFHKISNAYD VGKRKRRKIS HSDHTVCDEI LRWHKTGKSR  120
SILDSNGVIK GWKKILVLYI GSRKGGGKTV KTNWRMHQYH LGVDQDEKQE ELVVSKVFYQ  180
LESNNAGEND PTTPITYLPQ PRRPNGSPST TEQNQEGESR MSTVREAVEW LAGSSSHTVE  240
DAVVSGLDED LSRGRTPDAA CPDPEGQLLP LDAEAPQGFA DDLGAPPDIS LP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19297KRKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3577631e-177AK357763.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1061G08.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003581357.21e-103PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK22e-61NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM0VBR70.0M0VBR7_HORVD; Uncharacterized protein
STRINGMLOC_21966.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-62NAC family protein